STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_11772Histone H3. (98 aa)    
Predicted Functional Partners:
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.955
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.955
Avbf_11951
Histone H2A; Belongs to the histone H2A family.
 
 
 0.954
Avbf_02853
PHD finger protein 20-like protein 1.
   
 0.944
Avbf_05957
Putative histone-binding protein Caf1.
   
 0.942
Avbf_02563
Uncharacterized protein.
   
 0.942
Avbf_01649
Uncharacterized protein.
   
 0.942
Avbf_06149
Histone-lysine N-methyltransferase SETD1.
   
 0.942
Avbf_08268
Retinoblastoma-binding protein 5-like protein.
    
 0.940
Avbf_10859
Histone acetyltransferase KAT2B.
    
 0.939
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.