STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_15395Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. (195 aa)    
Predicted Functional Partners:
Avbf_06023
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.999
Avbf_01708
E3 ubiquitin-protein ligase TRIP12.
   
 0.996
Avbf_08513
Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.986
Avbf_11798
Ubiquitin-40S ribosomal protein S27a.
   
 0.982
Avbf_00476
Ubiquitin thioesterase otubain-like.
    
 0.982
Avbf_16365
Fanconi anemia group M protein.
    
 0.981
Avbf_00481
RING-box protein 1.
   
 0.977
Avbf_06427
Cullin-1; Belongs to the cullin family.
   
 0.975
Avbf_18859
Brefeldin A-inhibited guanine nucleotide-exchange protein 3.
   
 0.973
Avbf_00711
STIP1 homology and U box-containing protein 1.
   
 0.973
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.