STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_11269WD repeat domain-containing protein 83. (131 aa)    
Predicted Functional Partners:
Avbf_06540
Splicing factor 3B subunit 4.
    
 
 0.986
Avbf_11730
G patch domain-containing protein 1.
    
 
 0.949
Avbf_00853
G patch domain-containing protein 1.
    
 
 0.949
Avbf_13016
MPN domain-containing protein.
    
   0.938
Avbf_13015
Pre-mRNA-processing-splicing factor 8.
    
   0.938
Avbf_00935
Ragulator complex protein LAMTOR3.
   
 0.907
Avbf_04601
CWF19-like protein 2.
   
 
 0.868
Avbf_12766
Intron-binding protein aquarius.
    
 
 0.850
Avbf_15470
Pre-mRNA-splicing factor Syf2.
    
   0.821
Avbf_12728
Pre-mRNA-processing factor 17.
    
   0.821
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.