Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_00396 | Avbf_01078 | A0A444THS2 | A0A444TNF2 | Synaptobrevin-like protein YKT6. | Ras-related protein Rab6. | 0.847 |
Avbf_00396 | Avbf_02141 | A0A444THS2 | A0A444TJ27 | Synaptobrevin-like protein YKT6. | Vesicle transport through interaction with t-SNAREs-like protein 1A. | 0.999 |
Avbf_00396 | Avbf_03480 | A0A444THS2 | A0A444TTX1 | Synaptobrevin-like protein YKT6. | Vacuolar protein sorting-associated protein 41-like protein. | 0.988 |
Avbf_00396 | Avbf_07322 | A0A444THS2 | A0A444SDK6 | Synaptobrevin-like protein YKT6. | Vacuolar protein sorting-associated protein 11-like protein. | 0.495 |
Avbf_00396 | Avbf_11545 | A0A444THS2 | A0A444SGW0 | Synaptobrevin-like protein YKT6. | Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. | 0.956 |
Avbf_00396 | Avbf_12055 | A0A444THS2 | A0A444SZJ5 | Synaptobrevin-like protein YKT6. | Transforming growth factor-beta receptor-associated protein 1. | 0.896 |
Avbf_00396 | Avbf_12721 | A0A444THS2 | A0A444T2M2 | Synaptobrevin-like protein YKT6. | Vam6/Vps39-like protein. | 0.953 |
Avbf_00396 | Avbf_16590 | A0A444THS2 | A0A444SDS6 | Synaptobrevin-like protein YKT6. | Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. | 0.958 |
Avbf_00396 | Avbf_16825 | A0A444THS2 | A0A444SNG4 | Synaptobrevin-like protein YKT6. | Vacuolar protein sorting-associated protein 16-like protein. | 0.985 |
Avbf_01078 | Avbf_00396 | A0A444TNF2 | A0A444THS2 | Ras-related protein Rab6. | Synaptobrevin-like protein YKT6. | 0.847 |
Avbf_01078 | Avbf_02141 | A0A444TNF2 | A0A444TJ27 | Ras-related protein Rab6. | Vesicle transport through interaction with t-SNAREs-like protein 1A. | 0.839 |
Avbf_01078 | Avbf_11545 | A0A444TNF2 | A0A444SGW0 | Ras-related protein Rab6. | Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. | 0.955 |
Avbf_01078 | Avbf_12055 | A0A444TNF2 | A0A444SZJ5 | Ras-related protein Rab6. | Transforming growth factor-beta receptor-associated protein 1. | 0.827 |
Avbf_01078 | Avbf_12721 | A0A444TNF2 | A0A444T2M2 | Ras-related protein Rab6. | Vam6/Vps39-like protein. | 0.942 |
Avbf_01078 | Avbf_16590 | A0A444TNF2 | A0A444SDS6 | Ras-related protein Rab6. | Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. | 0.955 |
Avbf_02141 | Avbf_00396 | A0A444TJ27 | A0A444THS2 | Vesicle transport through interaction with t-SNAREs-like protein 1A. | Synaptobrevin-like protein YKT6. | 0.999 |
Avbf_02141 | Avbf_01078 | A0A444TJ27 | A0A444TNF2 | Vesicle transport through interaction with t-SNAREs-like protein 1A. | Ras-related protein Rab6. | 0.839 |
Avbf_02141 | Avbf_03480 | A0A444TJ27 | A0A444TTX1 | Vesicle transport through interaction with t-SNAREs-like protein 1A. | Vacuolar protein sorting-associated protein 41-like protein. | 0.988 |
Avbf_02141 | Avbf_07322 | A0A444TJ27 | A0A444SDK6 | Vesicle transport through interaction with t-SNAREs-like protein 1A. | Vacuolar protein sorting-associated protein 11-like protein. | 0.988 |
Avbf_02141 | Avbf_11545 | A0A444TJ27 | A0A444SGW0 | Vesicle transport through interaction with t-SNAREs-like protein 1A. | Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. | 0.963 |
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