STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_14227Spliceosome-associated protein CWC15-like protein. (148 aa)    
Predicted Functional Partners:
Avbf_00929
Cell division cycle 5-like protein.
   
 0.989
Avbf_01541
Pleiotropic regulator 1.
   
 0.989
Avbf_14967
Pre-mRNA-processing factor 19.
    
 0.978
Avbf_03648
DUF1716 domain-containing protein.
    
 0.978
Avbf_03647
Beta-catenin-like protein 1.
    
 0.978
Avbf_02144
Pre-mRNA-processing factor 19.
    
 0.978
Avbf_02704
Transcription elongation regulator 1.
   
  0.968
Avbf_04244
U1 small nuclear ribonucleoprotein A.
   
 
 0.965
Avbf_15470
Pre-mRNA-splicing factor Syf2.
   
 
 0.965
Avbf_00198
U5 small nuclear ribonucleoprotein component.
    
 
 0.964
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.