STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_11054Cadherin-87A. (245 aa)    
Predicted Functional Partners:
Avbf_01451
Armadillo segment polarity protein.
    
 0.937
Avbf_00154
Catenin delta-2.
    
 0.928
Avbf_06202
Catenin alpha.
    
 0.925
Avbf_18797
Armadillo repeat-containing protein 2.
    
 0.913
Avbf_04201
Cadherin-23.
 
     0.888
Avbf_04837
Protocadherin-15.
 
 
0.883
Avbf_10374
Uridine-cytidine kinase-like 1.
    
 0.848
Avbf_16764
Uridine-cytidine kinase-like 1.
    
 0.848
Avbf_11097
Uridine-cytidine kinase-like 1.
    
 0.848
Avbf_11098
PRK domain-containing protein.
    
 0.848
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.