STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_12065RWD domain-containing protein 4. (96 aa)    
Predicted Functional Partners:
Avbf_08135
Proteasome subunit beta type-4.
   
 
 0.970
Avbf_09166
GTP-binding protein.
   
 
 0.963
Avbf_08455
Mitogen-activated protein kinase kinase kinase 4.
    
   0.835
Avbf_02046
Mitogen-activated protein kinase kinase kinase 4.
    
   0.835
Avbf_07040
Uncharacterized protein.
   
   0.750
Avbf_07041
ESF1-like protein.
   
   0.750
Avbf_07295
Zinc finger protein.
  
 
   0.728
Avbf_04079
Zinc finger CCCH domain-containing protein 15-like protein.
   
 
 0.691
Avbf_01326
Protein BCCIP-like protein.
   
    0.648
Avbf_03718
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
    0.645
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.