Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01330 | Avbf_03670 | A0A444TPR5 | A0A444T9K0 | Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Twitchin. | 0.619 |
Avbf_01330 | Avbf_03671 | A0A444TPR5 | A0A444T9R9 | Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Disorganized muscle protein 1. | 0.619 |
Avbf_01330 | Avbf_04489 | A0A444TPR5 | A0A444TEV7 | Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1. | 0.426 |
Avbf_01330 | Avbf_14137 | A0A444TPR5 | A0A444SI30 | Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Uncharacterized protein. | 0.426 |
Avbf_01330 | Avbf_16605 | A0A444TPR5 | A0A444T3U0 | Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | Fibrinogen C-terminal domain-containing protein. | 0.897 |
Avbf_01412 | Avbf_16605 | A0A444TDY7 | A0A444T3U0 | Protein-serine/threonine kinase. | Fibrinogen C-terminal domain-containing protein. | 0.900 |
Avbf_02853 | Avbf_04489 | A0A444SL86 | A0A444TEV7 | PHD finger protein 20-like protein 1. | Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1. | 0.509 |
Avbf_02853 | Avbf_12383 | A0A444SL86 | A0A444T0V6 | PHD finger protein 20-like protein 1. | KAT8 regulatory NSL complex subunit 2. | 0.989 |
Avbf_02853 | Avbf_14137 | A0A444SL86 | A0A444SI30 | PHD finger protein 20-like protein 1. | Uncharacterized protein. | 0.509 |
Avbf_02853 | Avbf_16605 | A0A444SL86 | A0A444T3U0 | PHD finger protein 20-like protein 1. | Fibrinogen C-terminal domain-containing protein. | 0.921 |
Avbf_03670 | Avbf_01330 | A0A444T9K0 | A0A444TPR5 | Twitchin. | Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.619 |
Avbf_03670 | Avbf_03671 | A0A444T9K0 | A0A444T9R9 | Twitchin. | Disorganized muscle protein 1. | 0.993 |
Avbf_03670 | Avbf_04489 | A0A444T9K0 | A0A444TEV7 | Twitchin. | Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1. | 0.969 |
Avbf_03670 | Avbf_14137 | A0A444T9K0 | A0A444SI30 | Twitchin. | Uncharacterized protein. | 0.969 |
Avbf_03670 | Avbf_14239 | A0A444T9K0 | A0A444SD36 | Twitchin. | Complement factor H-related protein 4. | 0.451 |
Avbf_03670 | Avbf_16605 | A0A444T9K0 | A0A444T3U0 | Twitchin. | Fibrinogen C-terminal domain-containing protein. | 0.921 |
Avbf_03671 | Avbf_01330 | A0A444T9R9 | A0A444TPR5 | Disorganized muscle protein 1. | Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.619 |
Avbf_03671 | Avbf_03670 | A0A444T9R9 | A0A444T9K0 | Disorganized muscle protein 1. | Twitchin. | 0.993 |
Avbf_03671 | Avbf_04489 | A0A444T9R9 | A0A444TEV7 | Disorganized muscle protein 1. | Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1. | 0.969 |
Avbf_03671 | Avbf_14137 | A0A444T9R9 | A0A444SI30 | Disorganized muscle protein 1. | Uncharacterized protein. | 0.969 |
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