STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_14525D-2-hydroxyglutarate dehydrogenase, mitochondrial. (449 aa)    
Predicted Functional Partners:
Avbf_08503
DNA methyltransferase 1-associated protein 1.
   
 0.983
Avbf_10390
Actin-like protein 6A; Belongs to the actin family.
   
 0.978
Avbf_01125
YEATS domain-containing protein 4.
   
 0.978
Avbf_00761
Mortality factor 4-like protein 1.
   
 0.976
Avbf_09160
Chromatin modification-related protein MEAF6.
    
 0.966
Avbf_07500
Chromatin modification-related protein MEAF6.
    
 0.966
Avbf_06765
Bromodomain-containing protein 1.
    
 0.945
Avbf_06943
MRG/MORF4L-binding protein.
    
 0.941
Avbf_07511
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.941
Avbf_13952
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
    
 0.936
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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