STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_15966Aspartate-semialdehyde dehydrogenase. (207 aa)    
Predicted Functional Partners:
Avbf_12485
Phosphoglycerate kinase.
  
 0.982
Avbf_15915
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.941
Avbf_06222
Acetyl-CoA carboxylase.
     
 0.896
Avbf_10770
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.881
Avbf_03362
Threonine synthase-like 2.
  
 
 0.879
Avbf_18881
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.878
Avbf_08540
Orn_DAP_Arg_deC domain-containing protein.
  
 
 0.878
Avbf_08541
Ornithine decarboxylase.
  
 
 0.878
Avbf_08570
Diaminopimelate decarboxylase.
  
 
 0.878
Avbf_01442
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.878
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.