STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_18289Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
Avbf_05301
PLA2c domain-containing protein.
   
 
 0.655
Avbf_18000
Cytosolic phospholipase A2.
   
 
 0.655
Avbf_10867
Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3.
     
 0.584
Avbf_02347
85/88 kDa calcium-independent phospholipase A2.
   
 0.564
Avbf_04984
Aspartate aminotransferase.
    
 0.543
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
     
 0.529
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
     
 0.529
Avbf_07335
Protein henna.
     
 0.521
Avbf_07577
Prostaglandin E synthase 3.
     
 0.517
Avbf_17846
Phosphatidylcholine-sterol acyltransferase.
     
 0.516
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.