STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07185DNA primase; Belongs to the eukaryotic-type primase small subunit family. (378 aa)    
Predicted Functional Partners:
Avbf_05828
DNA polymerase alpha catalytic subunit.
   
 0.999
Avbf_00759
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 0.999
Avbf_02001
DNA primase large subunit.
  
 0.999
Avbf_03532
DNA polymerase.
   
 0.996
Avbf_04829
Replication factor C subunit 4.
   
 0.993
Avbf_10598
DNA replication licensing factor mcm5; Belongs to the MCM family.
   
 0.992
Avbf_04721
DNA polymerase zeta catalytic subunit.
   
 0.989
Avbf_04720
Uncharacterized protein.
   
 0.989
Avbf_03180
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.984
Avbf_05999
Replication protein A 32 kDa subunit.
   
 0.977
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.