STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10747Erythroid differentiation-related factor 1. (1231 aa)    
Predicted Functional Partners:
Avbf_12463
Tetratricopeptide repeat protein 4.
    
   0.747
Avbf_07227
Cysteine and histidine-rich domain-containing protein.
    
   0.696
Avbf_06546
Hsp70-binding protein 1.
    
 
 0.654
Avbf_14633
Hsp70-binding protein 1.
    
 
 0.654
Avbf_01983
Protein Hikeshi.
      
 0.508
Avbf_01168
Liprin-beta-1.
      
 0.442
Avbf_02660
Cold shock domain-containing protein.
      
 0.440
Avbf_08719
Inactive phospholipid phosphatase 7.
      
 0.433
Avbf_06298
Inhibitor of growth protein.
      
 0.410
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.