Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01768 | Avbf_06450 | A0A444TV77 | A0A444TT88 | Period circadian protein. | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | 0.989 |
Avbf_01768 | Avbf_10865 | A0A444TV77 | A0A444T4Y3 | Period circadian protein. | Orange domain-containing protein. | 0.845 |
Avbf_01768 | Avbf_11568 | A0A444TV77 | A0A444STK3 | Period circadian protein. | Neuronal PAS domain-containing protein 2. | 0.991 |
Avbf_02362 | Avbf_10865 | A0A444TG17 | A0A444T4Y3 | Geranylgeranyl transferase type-1 subunit beta. | Orange domain-containing protein. | 0.798 |
Avbf_02545 | Avbf_05643 | A0A444THD3 | A0A444STX7 | Fanconi anemia group A protein-like. | 60S ribosomal protein L10a. | 0.974 |
Avbf_02545 | Avbf_06627 | A0A444THD3 | A0A444SK13 | Fanconi anemia group A protein-like. | 39S ribosomal protein L1, mitochondrial. | 0.951 |
Avbf_02545 | Avbf_10865 | A0A444THD3 | A0A444T4Y3 | Fanconi anemia group A protein-like. | Orange domain-containing protein. | 0.799 |
Avbf_04288 | Avbf_10865 | A0A444TMV0 | A0A444T4Y3 | Transducin-like enhancer protein 4. | Orange domain-containing protein. | 0.818 |
Avbf_05643 | Avbf_02545 | A0A444STX7 | A0A444THD3 | 60S ribosomal protein L10a. | Fanconi anemia group A protein-like. | 0.974 |
Avbf_05643 | Avbf_09328 | A0A444STX7 | A0A444SKB2 | 60S ribosomal protein L10a. | Nuclear transport factor 2. | 0.974 |
Avbf_05643 | Avbf_10865 | A0A444STX7 | A0A444T4Y3 | 60S ribosomal protein L10a. | Orange domain-containing protein. | 0.854 |
Avbf_06450 | Avbf_01768 | A0A444TT88 | A0A444TV77 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Period circadian protein. | 0.989 |
Avbf_06450 | Avbf_10865 | A0A444TT88 | A0A444T4Y3 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Orange domain-containing protein. | 0.739 |
Avbf_06450 | Avbf_11568 | A0A444TT88 | A0A444STK3 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Neuronal PAS domain-containing protein 2. | 0.996 |
Avbf_06627 | Avbf_02545 | A0A444SK13 | A0A444THD3 | 39S ribosomal protein L1, mitochondrial. | Fanconi anemia group A protein-like. | 0.951 |
Avbf_06627 | Avbf_09328 | A0A444SK13 | A0A444SKB2 | 39S ribosomal protein L1, mitochondrial. | Nuclear transport factor 2. | 0.951 |
Avbf_06627 | Avbf_10865 | A0A444SK13 | A0A444T4Y3 | 39S ribosomal protein L1, mitochondrial. | Orange domain-containing protein. | 0.799 |
Avbf_09328 | Avbf_05643 | A0A444SKB2 | A0A444STX7 | Nuclear transport factor 2. | 60S ribosomal protein L10a. | 0.974 |
Avbf_09328 | Avbf_06627 | A0A444SKB2 | A0A444SK13 | Nuclear transport factor 2. | 39S ribosomal protein L1, mitochondrial. | 0.951 |
Avbf_09328 | Avbf_10865 | A0A444SKB2 | A0A444T4Y3 | Nuclear transport factor 2. | Orange domain-containing protein. | 0.799 |
page 1 of 2