STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10865Orange domain-containing protein. (357 aa)    
Predicted Functional Partners:
Avbf_05643
60S ribosomal protein L10a.
    
  0.854
Avbf_01768
Period circadian protein.
    
 0.845
Avbf_13439
Protein groucho-2.
    
 0.818
Avbf_04288
Transducin-like enhancer protein 4.
    
 0.818
Avbf_06627
39S ribosomal protein L1, mitochondrial.
    
  0.799
Avbf_09328
Nuclear transport factor 2.
    
  0.799
Avbf_02545
Fanconi anemia group A protein-like.
    
  0.799
Avbf_02362
Geranylgeranyl transferase type-1 subunit beta.
    
 
 0.798
Avbf_06450
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
    
 0.739
Avbf_11568
Neuronal PAS domain-containing protein 2.
    
 0.733
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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