STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_06319Sedoheptulokinase. (237 aa)    
Predicted Functional Partners:
Avbf_08146
26S proteasome non-ATPase regulatory subunit 4.
   
 0.966
Avbf_13144
26S proteasome non-ATPase regulatory subunit 12.
   
 0.965
Avbf_04754
26S proteasome non-ATPase regulatory subunit 11.
   
 0.965
Avbf_09529
26S proteasome non-ATPase regulatory subunit 3.
   
 0.964
Avbf_07784
26S proteasome non-ATPase regulatory subunit 2.
   
 0.964
Avbf_09188
26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.
   
 0.963
Avbf_01379
26S proteasome non-ATPase regulatory subunit 13.
   
 0.963
Avbf_08070
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.961
Avbf_08138
Proteasome subunit beta.
   
 0.961
Avbf_04638
Proteasome subunit beta.
   
 0.960
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.