STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_09056Ribos_L4_asso_C domain-containing protein. (504 aa)    
Predicted Functional Partners:
Avbf_13160
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
Avbf_05769
40S ribosomal protein S20.
  
 0.997
Avbf_06900
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.997
Avbf_14524
60S ribosomal protein L14.
  
 0.997
Avbf_07247
60S ribosomal protein L7a.
  
 0.997
Avbf_08880
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.997
Avbf_01498
60S ribosomal protein L7.
  
 0.997
Avbf_01139
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.997
Avbf_03451
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.997
Avbf_07264
40S ribosomal protein S3.
  
 0.997
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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