STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_05322Methylosome protein 50. (306 aa)    
Predicted Functional Partners:
Avbf_02248
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.999
Avbf_02855
Symplekin.
    
 0.998
Avbf_13829
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.998
Avbf_06154
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.998
Avbf_02423
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
    
 0.997
Avbf_18559
WD repeat-containing protein 82.
   
 0.997
Avbf_04396
Cleavage stimulation factor subunit 3.
   
 0.992
Avbf_00554
Cleavage stimulation factor subunit 2.
    
 0.990
Avbf_06786
Cleavage and polyadenylation specificity factor subunit 4.
   
 0.985
Avbf_10371
Zinc finger CCCH domain-containing protein 7.
   
 0.984
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.