STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_18213Uncharacterized protein. (101 aa)    
Predicted Functional Partners:
Avbf_03400
tRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6.
   
 0.997
Avbf_01823
Periodic tryptophan protein 2-like protein.
   
    0.859
Avbf_08033
tRNA (guanine(46)-N(7))-methyltransferase.
  
 
 0.839
Avbf_08034
tRNA (guanine(46)-N(7))-methyltransferase.
  
 
 0.839
Avbf_04451
Ribosome biogenesis protein BOP1-like protein.
   
    0.835
Avbf_06441
RNA 3'-terminal phosphate cyclase-like protein.
   
    0.833
Avbf_02023
Pre-rRNA-processing protein TSR1-like protein.
   
    0.817
Avbf_09380
Uncharacterized protein.
   
  
 0.810
Avbf_03887
tRNA (Guanine(10)-N2)-methyltransferase.
   
  
 0.804
Avbf_02757
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.803
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (28%) [HD]