STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_09338Homeotic protein empty spiracles. (89 aa)    
Predicted Functional Partners:
Avbf_19094
Silk gland factor 1.
    
 0.697
Avbf_18344
T-box-containing protein TBX6L.
    
 0.609
Avbf_00300
Brachyury protein-like A.
    
 0.609
Avbf_02815
T-box-containing protein TBX6L.
    
 0.609
Avbf_09203
Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.
    
  0.460
Avbf_09204
Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.
    
  0.460
Avbf_11021
Putative ATP-dependent RNA helicase DDX17.
    
  0.460
Avbf_11022
DEAD-box ATP-dependent RNA helicase 45.
    
  0.460
Avbf_14584
Putative ATP-dependent RNA helicase DDX17.
    
  0.460
Avbf_14272
ATP-dependent RNA helicase DDX51; Belongs to the DEAD box helicase family.
    
  0.460
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.