STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_12216Ubiquitinyl hydrolase 1. (588 aa)    
Predicted Functional Partners:
Avbf_11798
Ubiquitin-40S ribosomal protein S27a.
    
 0.981
Avbf_13160
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.971
Avbf_08441
Uncharacterized protein.
    
 0.971
Avbf_04423
Uncharacterized protein.
    
 0.965
Avbf_12418
Ubiquilin-1.
   
 0.946
Avbf_07072
Ubiquilin-1.
   
 0.946
Avbf_06930
Ubiquitin-like protein 7.
   
 0.943
Avbf_00817
Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family.
   
 
 0.912
Avbf_07982
Ubiquitin carboxyl-terminal hydrolase 48; Belongs to the peptidase C19 family.
   
 
 0.904
Avbf_07058
Ubiquitin fusion degradation protein 1-like protein.
    
 0.901
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.