STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_13804Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (455 aa)    
Predicted Functional Partners:
Avbf_03148
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
   
 0.817
Avbf_07844
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
   
 0.817
Avbf_04039
Putative cysteine proteinase; Belongs to the peptidase C1 family.
  
0.780
Avbf_05300
Transport and Golgi organization protein 2-like protein.
    
   0.767
Avbf_05328
Granulin.
   
 0.761
Avbf_05327
Uncharacterized protein.
   
 0.761
Avbf_11155
Granulin-1.
   
 0.761
Avbf_11154
Granulin.
   
 0.761
Avbf_02312
Cathepsin B; Belongs to the peptidase C1 family.
   
0.746
Avbf_11295
Prosaposin.
   
 
 0.744
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.