Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01205 | Avbf_05800 | A0A444TFK2 | A0A444TDV4 | Uncharacterized protein. | Very low-density lipoprotein receptor. | 0.519 |
Avbf_01205 | Avbf_11178 | A0A444TFK2 | A0A444SXP7 | Uncharacterized protein. | Low-density lipoprotein receptor. | 0.501 |
Avbf_01205 | Avbf_12008 | A0A444TFK2 | A0A444T7V8 | Uncharacterized protein. | Uncharacterized protein. | 0.847 |
Avbf_01866 | Avbf_10870 | A0A444TSQ3 | A0A444TG27 | Nidogen-1. | Low-density lipoprotein receptor. | 0.521 |
Avbf_01866 | Avbf_12008 | A0A444TSQ3 | A0A444T7V8 | Nidogen-1. | Uncharacterized protein. | 0.814 |
Avbf_03061 | Avbf_12008 | A0A444TS84 | A0A444T7V8 | Dystroglycan. | Uncharacterized protein. | 0.911 |
Avbf_05800 | Avbf_01205 | A0A444TDV4 | A0A444TFK2 | Very low-density lipoprotein receptor. | Uncharacterized protein. | 0.519 |
Avbf_05800 | Avbf_12008 | A0A444TDV4 | A0A444T7V8 | Very low-density lipoprotein receptor. | Uncharacterized protein. | 0.737 |
Avbf_06865 | Avbf_12008 | A0A444SL03 | A0A444T7V8 | Pro-epidermal growth factor. | Uncharacterized protein. | 0.767 |
Avbf_10870 | Avbf_01866 | A0A444TG27 | A0A444TSQ3 | Low-density lipoprotein receptor. | Nidogen-1. | 0.521 |
Avbf_10870 | Avbf_12008 | A0A444TG27 | A0A444T7V8 | Low-density lipoprotein receptor. | Uncharacterized protein. | 0.763 |
Avbf_10870 | Avbf_12934 | A0A444TG27 | A0A444STG6 | Low-density lipoprotein receptor. | Very low-density lipoprotein receptor. | 0.899 |
Avbf_11178 | Avbf_01205 | A0A444SXP7 | A0A444TFK2 | Low-density lipoprotein receptor. | Uncharacterized protein. | 0.501 |
Avbf_11178 | Avbf_12008 | A0A444SXP7 | A0A444T7V8 | Low-density lipoprotein receptor. | Uncharacterized protein. | 0.851 |
Avbf_12008 | Avbf_01205 | A0A444T7V8 | A0A444TFK2 | Uncharacterized protein. | Uncharacterized protein. | 0.847 |
Avbf_12008 | Avbf_01866 | A0A444T7V8 | A0A444TSQ3 | Uncharacterized protein. | Nidogen-1. | 0.814 |
Avbf_12008 | Avbf_03061 | A0A444T7V8 | A0A444TS84 | Uncharacterized protein. | Dystroglycan. | 0.911 |
Avbf_12008 | Avbf_05800 | A0A444T7V8 | A0A444TDV4 | Uncharacterized protein. | Very low-density lipoprotein receptor. | 0.737 |
Avbf_12008 | Avbf_06865 | A0A444T7V8 | A0A444SL03 | Uncharacterized protein. | Pro-epidermal growth factor. | 0.767 |
Avbf_12008 | Avbf_10870 | A0A444T7V8 | A0A444TG27 | Uncharacterized protein. | Low-density lipoprotein receptor. | 0.763 |
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