Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_00788 | Avbf_02775 | A0A444TI26 | A0A444T8C7 | Ubiquitin-conjugating enzyme E2 D2B. | E3 ubiquitin-protein ligase. | 0.928 |
Avbf_00788 | Avbf_03486 | A0A444TI26 | A0A444TR08 | Ubiquitin-conjugating enzyme E2 D2B. | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | 0.709 |
Avbf_00788 | Avbf_04423 | A0A444TI26 | A0A444TLS5 | Ubiquitin-conjugating enzyme E2 D2B. | Uncharacterized protein. | 0.954 |
Avbf_00788 | Avbf_07737 | A0A444TI26 | A0A444SN37 | Ubiquitin-conjugating enzyme E2 D2B. | Ubiquitin-conjugating enzyme E2-24 kDa; Belongs to the ubiquitin-conjugating enzyme family. | 0.689 |
Avbf_00788 | Avbf_08441 | A0A444TI26 | A0A444SY95 | Ubiquitin-conjugating enzyme E2 D2B. | Uncharacterized protein. | 0.958 |
Avbf_00788 | Avbf_11798 | A0A444TI26 | A0A444SLA0 | Ubiquitin-conjugating enzyme E2 D2B. | Ubiquitin-40S ribosomal protein S27a. | 0.981 |
Avbf_00788 | Avbf_12418 | A0A444TI26 | A0A444SL46 | Ubiquitin-conjugating enzyme E2 D2B. | Ubiquilin-1. | 0.883 |
Avbf_00788 | Avbf_13160 | A0A444TI26 | A0A444SK24 | Ubiquitin-conjugating enzyme E2 D2B. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.960 |
Avbf_02775 | Avbf_00788 | A0A444T8C7 | A0A444TI26 | E3 ubiquitin-protein ligase. | Ubiquitin-conjugating enzyme E2 D2B. | 0.928 |
Avbf_02775 | Avbf_03486 | A0A444T8C7 | A0A444TR08 | E3 ubiquitin-protein ligase. | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | 0.933 |
Avbf_02775 | Avbf_04423 | A0A444T8C7 | A0A444TLS5 | E3 ubiquitin-protein ligase. | Uncharacterized protein. | 0.920 |
Avbf_02775 | Avbf_07737 | A0A444T8C7 | A0A444SN37 | E3 ubiquitin-protein ligase. | Ubiquitin-conjugating enzyme E2-24 kDa; Belongs to the ubiquitin-conjugating enzyme family. | 0.934 |
Avbf_02775 | Avbf_07856 | A0A444T8C7 | A0A444SL74 | E3 ubiquitin-protein ligase. | Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. | 0.929 |
Avbf_02775 | Avbf_08441 | A0A444T8C7 | A0A444SY95 | E3 ubiquitin-protein ligase. | Uncharacterized protein. | 0.926 |
Avbf_02775 | Avbf_11798 | A0A444T8C7 | A0A444SLA0 | E3 ubiquitin-protein ligase. | Ubiquitin-40S ribosomal protein S27a. | 0.931 |
Avbf_02775 | Avbf_12418 | A0A444T8C7 | A0A444SL46 | E3 ubiquitin-protein ligase. | Ubiquilin-1. | 0.878 |
Avbf_02775 | Avbf_13160 | A0A444T8C7 | A0A444SK24 | E3 ubiquitin-protein ligase. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.926 |
Avbf_02775 | Avbf_15395 | A0A444T8C7 | A0A444T1W9 | E3 ubiquitin-protein ligase. | Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. | 0.929 |
Avbf_03486 | Avbf_00788 | A0A444TR08 | A0A444TI26 | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-conjugating enzyme E2 D2B. | 0.709 |
Avbf_03486 | Avbf_02775 | A0A444TR08 | A0A444T8C7 | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | E3 ubiquitin-protein ligase. | 0.933 |
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