STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_15376Guanine nucleotide exchange factor MSS4-like protein. (115 aa)    
Predicted Functional Partners:
Avbf_11262
GTP-binding protein YPTC1.
    
 
 0.948
Avbf_05803
Ras-related protein Rab-33B.
    
 
 0.943
Avbf_05802
Ras-related protein Rab-33.
    
 
 0.943
Avbf_13565
Ras-related protein Rab-8A.
    
 
 0.890
Avbf_15059
Uncharacterized protein.
    
 
 0.890
Avbf_06410
Ras-related protein RABE1a.
    
 
 0.890
Avbf_02778
Ras-related protein Rab-3.
    
 
 0.890
Avbf_13535
Apple domain-containing protein.
    
 
 0.862
Avbf_13366
Uncharacterized protein.
    
 
 0.862
Avbf_13367
Ras-related protein Rab-28.
    
 
 0.862
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.