STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_04887PX domain-containing protein kinase-like protein. (552 aa)    
Predicted Functional Partners:
Avbf_00986
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
 
      0.705
Avbf_10344
Vesicle transport protein USE1.
     
 0.618
Avbf_01998
Sorting nexin-12.
     
 0.601
Avbf_14414
t-SNARE coiled-coil homology domain-containing protein.
    
 0.597
Avbf_08005
Syntaxin-10.
    
 0.597
Avbf_09023
Syntaxin-7; Belongs to the syntaxin family.
     
 0.583
Avbf_00396
Synaptobrevin-like protein YKT6.
     
 0.537
Avbf_15047
Non-specific serine/threonine protein kinase.
    
 0.524
Avbf_04796
Non-specific serine/threonine protein kinase.
    
 0.524
Avbf_06978
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
 0.524
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.