Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01440 | Avbf_04264 | A0A444SK84 | A0A444T8Z2 | Helicase domino. | Zinc finger and BTB domain-containing protein 8A. | 0.640 |
Avbf_01440 | Avbf_05005 | A0A444SK84 | A0A444T6M5 | Helicase domino. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.847 |
Avbf_01440 | Avbf_11365 | A0A444SK84 | A0A444SDQ9 | Helicase domino. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.847 |
Avbf_01845 | Avbf_02298 | A0A444TDW9 | A0A444TIJ3 | CAVP-target protein. | Double-strand-break repair protein rad21-like protein. | 0.758 |
Avbf_01845 | Avbf_04264 | A0A444TDW9 | A0A444T8Z2 | CAVP-target protein. | Zinc finger and BTB domain-containing protein 8A. | 0.621 |
Avbf_01845 | Avbf_05005 | A0A444TDW9 | A0A444T6M5 | CAVP-target protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.999 |
Avbf_01845 | Avbf_11365 | A0A444TDW9 | A0A444SDQ9 | CAVP-target protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.999 |
Avbf_02298 | Avbf_01845 | A0A444TIJ3 | A0A444TDW9 | Double-strand-break repair protein rad21-like protein. | CAVP-target protein. | 0.758 |
Avbf_02298 | Avbf_04264 | A0A444TIJ3 | A0A444T8Z2 | Double-strand-break repair protein rad21-like protein. | Zinc finger and BTB domain-containing protein 8A. | 0.698 |
Avbf_02298 | Avbf_05005 | A0A444TIJ3 | A0A444T6M5 | Double-strand-break repair protein rad21-like protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.512 |
Avbf_02298 | Avbf_08944 | A0A444TIJ3 | A0A444SSP9 | Double-strand-break repair protein rad21-like protein. | Cohesin subunit SA-2. | 0.999 |
Avbf_02298 | Avbf_11365 | A0A444TIJ3 | A0A444SDQ9 | Double-strand-break repair protein rad21-like protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.512 |
Avbf_03533 | Avbf_03736 | A0A444TVT0 | A0A444TB53 | Putative ATP-dependent RNA helicase DHX34. | 28S ribosomal protein S2, mitochondrial. | 0.997 |
Avbf_03533 | Avbf_04264 | A0A444TVT0 | A0A444T8Z2 | Putative ATP-dependent RNA helicase DHX34. | Zinc finger and BTB domain-containing protein 8A. | 0.748 |
Avbf_03533 | Avbf_05005 | A0A444TVT0 | A0A444T6M5 | Putative ATP-dependent RNA helicase DHX34. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.970 |
Avbf_03533 | Avbf_11365 | A0A444TVT0 | A0A444SDQ9 | Putative ATP-dependent RNA helicase DHX34. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.970 |
Avbf_03736 | Avbf_03533 | A0A444TB53 | A0A444TVT0 | 28S ribosomal protein S2, mitochondrial. | Putative ATP-dependent RNA helicase DHX34. | 0.997 |
Avbf_03736 | Avbf_04264 | A0A444TB53 | A0A444T8Z2 | 28S ribosomal protein S2, mitochondrial. | Zinc finger and BTB domain-containing protein 8A. | 0.618 |
Avbf_04264 | Avbf_01440 | A0A444T8Z2 | A0A444SK84 | Zinc finger and BTB domain-containing protein 8A. | Helicase domino. | 0.640 |
Avbf_04264 | Avbf_01845 | A0A444T8Z2 | A0A444TDW9 | Zinc finger and BTB domain-containing protein 8A. | CAVP-target protein. | 0.621 |
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