STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_12526UPF0544 protein C5orf45-like protein. (206 aa)    
Predicted Functional Partners:
Avbf_13160
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
Avbf_11077
40S ribosomal protein S3a.
  
 0.998
Avbf_17019
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.998
Avbf_14858
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.998
Avbf_13711
40S ribosomal protein S19.
  
 0.998
Avbf_10251
40S ribosomal protein S6.
  
 0.998
Avbf_14601
Uncharacterized protein.
  
 0.997
Avbf_13476
40S ribosomal protein S14.
  
 0.997
Avbf_11554
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.997
Avbf_09641
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.997
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.