STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_06871Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
Avbf_04451
Ribosome biogenesis protein BOP1-like protein.
   
    0.834
Avbf_12753
Putative proline--tRNA ligase.
  
 
 0.810
Avbf_12754
Bifunctional glutamate/proline--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.810
Avbf_09380
Uncharacterized protein.
   
 
 0.795
Avbf_01070
tRNA pseudouridine synthase A, mitochondrial.
  
 
 0.774
Avbf_03853
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.771
Avbf_06577
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.771
Avbf_08033
tRNA (guanine(46)-N(7))-methyltransferase.
  
 
 0.763
Avbf_08034
tRNA (guanine(46)-N(7))-methyltransferase.
  
 
 0.763
Avbf_10296
tRNA (Uracil-5-)-methyltransferase-like protein A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.739
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.