Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Avbf_01655 | Avbf_04589 | A0A444TR85 | A0A444TFG7 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.988 |
| Avbf_01655 | Avbf_05088 | A0A444TR85 | A0A444TB92 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | Transcription initiation factor TFIID subunit 9. | 0.998 |
| Avbf_01655 | Avbf_05198 | A0A444TR85 | A0A444TDN8 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | Transcription initiation factor TFIID subunit 6. | 0.998 |
| Avbf_01655 | Avbf_05274 | A0A444TR85 | A0A444TGX2 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | Transcription initiation factor TFIID subunit 2. | 0.998 |
| Avbf_01655 | Avbf_05705 | A0A444TR85 | A0A444TJH0 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | Transcription factor SPT20-like protein. | 0.994 |
| Avbf_01655 | Avbf_06395 | A0A444TR85 | A0A444SHW6 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | Transcription initiation factor TFIID subunit 3. | 0.995 |
| Avbf_01655 | Avbf_06601 | A0A444TR85 | A0A444SS82 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | Transcription initiation factor TFIID subunit 11. | 0.998 |
| Avbf_01655 | Avbf_08320 | A0A444TR85 | A0A444SDQ3 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | TAF6-like RNA polymerase II factor-associated factor 65 kDa subunit 6L. | 0.988 |
| Avbf_01655 | Avbf_16232 | A0A444TR85 | A0A444SU89 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | SGF29 C-terminal domain-containing protein. | 0.991 |
| Avbf_01655 | Avbf_16934 | A0A444TR85 | A0A444T9K9 | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | Transcription initiation factor TFIID subunit 12. | 0.990 |
| Avbf_04589 | Avbf_01655 | A0A444TFG7 | A0A444TR85 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | 0.988 |
| Avbf_04589 | Avbf_05088 | A0A444TFG7 | A0A444TB92 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Transcription initiation factor TFIID subunit 9. | 0.989 |
| Avbf_04589 | Avbf_05198 | A0A444TFG7 | A0A444TDN8 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Transcription initiation factor TFIID subunit 6. | 0.991 |
| Avbf_04589 | Avbf_05705 | A0A444TFG7 | A0A444TJH0 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Transcription factor SPT20-like protein. | 0.991 |
| Avbf_04589 | Avbf_08320 | A0A444TFG7 | A0A444SDQ3 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | TAF6-like RNA polymerase II factor-associated factor 65 kDa subunit 6L. | 0.990 |
| Avbf_04589 | Avbf_16232 | A0A444TFG7 | A0A444SU89 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | SGF29 C-terminal domain-containing protein. | 0.996 |
| Avbf_04589 | Avbf_16934 | A0A444TFG7 | A0A444T9K9 | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | Transcription initiation factor TFIID subunit 12. | 0.990 |
| Avbf_05088 | Avbf_01655 | A0A444TB92 | A0A444TR85 | Transcription initiation factor TFIID subunit 9. | TAF5-like RNA polymerase II factor-associated factor 65 kDa subunit 5L. | 0.998 |
| Avbf_05088 | Avbf_04589 | A0A444TB92 | A0A444TFG7 | Transcription initiation factor TFIID subunit 9. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.989 |
| Avbf_05088 | Avbf_05198 | A0A444TB92 | A0A444TDN8 | Transcription initiation factor TFIID subunit 9. | Transcription initiation factor TFIID subunit 6. | 0.998 |
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