STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_14892Beta-glucuronidase. (133 aa)    
Predicted Functional Partners:
Avbf_10657
Ceramide glucosyltransferase.
     
 0.711
Avbf_11447
Serine dehydratase-like.
     
 0.711
Avbf_05280
L-threonine ammonia-lyase.
     
 0.711
Avbf_06058
Aldose 1-epimerase.
  
 
 0.685
Avbf_11369
UDP-glucose 4-epimerase.
  
 
 0.650
Avbf_13244
UDP-glucose 4-epimerase.
  
 
 0.650
Avbf_14097
N-acetylglucosamine-6-sulfatase.
  
 0.648
Avbf_03706
Arylsulfatase K.
  
 0.648
Avbf_03705
Steryl-sulfatase.
  
 0.648
Avbf_03704
Sulfatase domain-containing protein.
  
 0.648
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.