STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_15539RING finger protein 37. (436 aa)    
Predicted Functional Partners:
Avbf_01708
E3 ubiquitin-protein ligase TRIP12.
   
 0.971
Avbf_00472
Baculoviral IAP repeat-containing protein 6.
   
 0.967
Avbf_07058
Ubiquitin fusion degradation protein 1-like protein.
    
 
 0.950
Avbf_09573
Nuclear protein localization protein 4-like protein.
    
 
 0.946
Avbf_05617
Ubiquitin thioesterase OTU1.
    
 
 0.945
Avbf_13160
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.922
Avbf_04143
Ubiquitin-conjugating enzyme E2 Z.
   
 0.918
Avbf_08441
Uncharacterized protein.
    
 0.911
Avbf_07737
Ubiquitin-conjugating enzyme E2-24 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.902
Avbf_00019
(E3-independent) E2 ubiquitin-conjugating enzyme.
   
 0.896
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.