STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_14030Endonuclease_NS domain-containing protein. (172 aa)    
Predicted Functional Partners:
Avbf_07764
WD repeat-containing protein 18.
   
 0.952
Avbf_10106
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.946
Avbf_01235
Testis-expressed sequence 10 protein.
   
 0.945
Avbf_01845
CAVP-target protein.
   
 0.944
Avbf_01171
Calmodulin; Belongs to the calmodulin family.
    
 0.937
Avbf_01336
Alpha-actinin, sarcomeric.
   
 0.919
Avbf_13481
Guanine nucleotide-binding protein-like 3-like protein.
   
 0.904
Avbf_11326
Kalirin.
   
 0.895
Avbf_01139
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.895
Avbf_01776
Lamin Dm0; Belongs to the intermediate filament family.
    
 0.895
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.