STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_14630Transmembrane protein. (1784 aa)    
Predicted Functional Partners:
Avbf_02901
E3 ubiquitin-protein ligase MYCBP2.
 
     0.949
Avbf_00164
F-box/SPRY domain-containing protein 1.
    
 
 0.939
Avbf_06188
Mitogen-activated protein kinase kinase kinase 12.
    
 0.910
Avbf_01136
Protein gustavus.
    
 
 0.871
Avbf_13734
mRNA export factor.
    
 
 0.851
Avbf_11798
Ubiquitin-40S ribosomal protein S27a.
    
   0.841
Avbf_04423
Uncharacterized protein.
    
   0.808
Avbf_07856
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.780
Avbf_15395
Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.780
Avbf_02737
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.765
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.