STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_09787Zinc finger protein. (370 aa)    
Predicted Functional Partners:
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.879
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.879
Avbf_00899
General transcription factor 3C polypeptide 1.
    
 0.858
Avbf_02722
Transcription factor TFIIIB component B''-like protein.
    
 0.850
Avbf_11547
TATA-box-binding protein.
   
 0.786
Avbf_16926
General transcription factor 3C polypeptide 3.
    
 0.773
Avbf_14657
General transcription factor 3C polypeptide 3.
    
 0.773
Avbf_07119
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.765
Avbf_09219
Transcription factor IIIB 90 kDa subunit.
   
 
 0.757
Avbf_18466
TFIIB-type domain-containing protein.
   
 
 0.757
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.