STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_08541Ornithine decarboxylase. (201 aa)    
Predicted Functional Partners:
Avbf_10977
Ornithine decarboxylase antizyme 1.
    
 0.959
Avbf_07178
Ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.932
Avbf_15966
Aspartate-semialdehyde dehydrogenase.
  
 
 0.878
Avbf_13119
Putative threonine-phosphate decarboxylase.
  
 
 0.862
Avbf_13118
Aspartate aminotransferase.
  
 
 0.862
Avbf_14376
Aminotran_1_2 domain-containing protein.
  
 
 0.862
Avbf_08911
Kynurenine--oxoglutarate transaminase 3.
  
 
 0.862
Avbf_01266
Alanine aminotransferase 2-like.
  
 
 0.862
Avbf_07958
Spermine synthase.
  
 0.858
Avbf_11867
Arginase.
  
 
 0.856
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.