STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_02635Oligoribonuclease, mitochondrial. (328 aa)    
Predicted Functional Partners:
Avbf_18123
RNA exonuclease 4.
  
 0.746
Avbf_15113
Putative exonuclease GOR.
  
 0.730
Avbf_10976
Putative exonuclease.
  
 0.679
Avbf_14581
Putative exonuclease.
  
 0.679
Avbf_08257
Putative RNA exonuclease NEF-sp.
  
 0.679
Avbf_05341
Putative RNA exonuclease NEF-sp.
  
 0.679
Avbf_09845
PAB-dependent poly(A)-specific ribonuclease subunit PAN2.
  
 0.660
Avbf_05749
Three prime repair exonuclease 2.
  
 0.658
Avbf_11392
Ribosomal RNA small subunit methyltransferase NEP1.
   
    0.643
Avbf_15600
Uncharacterized protein.
  
 
 0.470
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.