STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_03950ABC transmembrane type-1 domain-containing protein. (100 aa)    
Predicted Functional Partners:
Avbf_02294
G protein-activated inward rectifier potassium channel 3.
    
 0.939
Avbf_03665
Inward rectifier potassium channel 4.
    
 0.939
Avbf_00045
Myosin light chain kinase, smooth muscle.
    
 0.751
Avbf_02557
Myosin light chain kinase, smooth muscle.
    
 0.751
Avbf_01150
Golgi-associated PDZ and coiled-coil motif-containing protein.
   
 0.744
Avbf_01580
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.737
Avbf_02844
Ubiquitin carboxyl-terminal hydrolase 10; Belongs to the peptidase C19 family.
    
  0.733
Avbf_08293
Tubulin beta-2 chain.
    
 0.722
Avbf_00200
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.720
Avbf_13981
Low molecular weight phosphotyrosine protein phosphatase.
   
 
 0.720
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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