STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_02260Bromodomain adjacent to zinc finger domain protein 2B. (1746 aa)    
Predicted Functional Partners:
Avbf_03217
Chromatin-remodeling complex ATPase chain Iswi.
    
 0.981
Avbf_01337
Lymphoid-specific helicase.
    
 0.961
Avbf_04935
DNA excision repair protein ERCC-6.
    
 0.916
Avbf_12569
DNA polymerase epsilon subunit 3.
    
 
 0.912
Avbf_05470
PHD finger protein 21A.
   
 0.900
Avbf_11902
Chromodomain-helicase-DNA-binding protein 7.
   
 0.898
Avbf_03337
Uncharacterized protein.
   
 0.898
Avbf_01440
Helicase domino.
   
 0.895
Avbf_18455
Uncharacterized protein.
   
 0.893
Avbf_13499
Transcriptional regulator ATRX.
   
 0.893
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.