STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_02507Methyltransferase-like protein 25. (309 aa)    
Predicted Functional Partners:
Avbf_07758
WD repeat-containing protein 24.
    
 0.963
Avbf_00986
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
     
 0.849
Avbf_09824
Zinc finger C2HC domain-containing protein 1A.
    
 
 0.827
Avbf_00208
Zinc finger C2HC domain-containing protein 1C.
    
 
 0.827
Avbf_14196
UPF0536 protein C12orf66-like protein.
    
 0.710
Avbf_06039
Kaptin.
     
 0.697
Avbf_07604
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
     
 0.678
Avbf_03522
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
     
 0.678
Avbf_07885
Nitrogen permease regulator 2-like protein.
     
 0.671
Avbf_10946
Vacuolar membrane-associated protein IML1.
     
 0.655
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.