STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_05103H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (267 aa)    
Predicted Functional Partners:
Avbf_14422
H/ACA ribonucleoprotein complex subunit 2-like protein.
  
 0.999
Avbf_14506
Protein regulator of cytokinesis 1.
   
 
 0.996
Avbf_15721
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.992
Avbf_17430
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
  
 0.992
Avbf_07247
60S ribosomal protein L7a.
  
 0.990
Avbf_04511
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.990
Avbf_04579
Telomerase Cajal body protein 1.
    
 0.990
Avbf_06500
Nucleolar protein 56.
   
 
 0.980
Avbf_08190
Nucleolar protein 58.
  
 
 0.971
Avbf_14466
Nucleolar protein 58.
  
 
 0.971
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.