STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_04282Protein wings apart-like. (938 aa)    
Predicted Functional Partners:
Avbf_02238
Sister chromatid cohesion protein PDS5-like protein B-B.
   
 0.994
Avbf_00374
Structural maintenance of chromosomes protein.
   
 0.990
Avbf_02298
Double-strand-break repair protein rad21-like protein.
    
 0.982
Avbf_08944
Cohesin subunit SA-2.
   
 0.979
Avbf_00199
Structural maintenance of chromosomes protein 1A.
   
 0.978
Avbf_01708
E3 ubiquitin-protein ligase TRIP12.
   
    0.971
Avbf_00704
Structural maintenance of chromosomes protein 4.
   
 0.964
Avbf_12393
Structural maintenance of chromosomes protein 2.
   
 0.949
Avbf_03487
Nipped-B protein.
   
 0.942
Avbf_00860
MAU2 chromatid cohesion factor-like protein.
     
 0.855
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.