STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_00654E3 ubiquitin-protein ligase RNF25. (316 aa)    
Predicted Functional Partners:
Avbf_07856
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.868
Avbf_15395
Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.868
Avbf_00788
Ubiquitin-conjugating enzyme E2 D2B.
    
 
 0.849
Avbf_07737
Ubiquitin-conjugating enzyme E2-24 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.847
Avbf_03486
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.836
Avbf_00019
(E3-independent) E2 ubiquitin-conjugating enzyme.
    
 
 0.757
Avbf_09158
Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.756
Avbf_04143
Ubiquitin-conjugating enzyme E2 Z.
    
 
 0.746
Avbf_00472
Baculoviral IAP repeat-containing protein 6.
    
 
 0.733
Avbf_01830
Ubiquitin-conjugating enzyme E2 L3.
    
 
 0.719
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.