STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_02799Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (86 aa)    
Predicted Functional Partners:
Avbf_10487
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.991
Avbf_06440
Trafficking protein particle complex subunit 5.
   
 0.991
Avbf_02231
Trafficking protein particle complex subunit 6B.
   
 0.987
Avbf_08590
Trafficking protein particle complex subunit 2.
    
 0.985
Avbf_03642
Trafficking protein particle complex subunit 8.
    
 0.984
Avbf_09165
Trafficking protein particle complex subunit 10.
    
 0.983
Avbf_07641
Trafficking protein particle complex subunit 11.
    
 0.975
Avbf_01656
Trafficking protein particle complex subunit 9.
   
 0.975
Avbf_11262
GTP-binding protein YPTC1.
    
 0.971
Avbf_13136
Trafficking protein particle complex subunit 12.
    
 0.958
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.