STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_00899General transcription factor 3C polypeptide 1. (287 aa)    
Predicted Functional Partners:
Avbf_16926
General transcription factor 3C polypeptide 3.
    
 0.971
Avbf_14657
General transcription factor 3C polypeptide 3.
    
 0.971
Avbf_09219
Transcription factor IIIB 90 kDa subunit.
   
 
 0.878
Avbf_18466
TFIIB-type domain-containing protein.
   
 
 0.878
Avbf_02722
Transcription factor TFIIIB component B''-like protein.
    
 0.863
Avbf_09787
Zinc finger protein.
    
 0.858
Avbf_07119
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.783
Avbf_11547
TATA-box-binding protein.
     
 0.776
Avbf_11767
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
     
 0.750
Avbf_13850
RNA_pol_Rpb1_1 domain-containing protein.
   
 
 0.742
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.