STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_08649Uncharacterized protein. (121 aa)    
Predicted Functional Partners:
Avbf_05615
4-hydroxyphenylpyruvate dioxygenase.
     
 0.737
Avbf_05613
4-hydroxyphenylpyruvate dioxygenase.
     
 0.737
Avbf_16446
Uncharacterized protein.
     
 0.673
Avbf_16447
Ras-related protein Rab-32.
     
 0.673
Avbf_14330
Ras-related protein Rab-32.
     
 0.673
Avbf_16983
Ras-related protein Rab-32.
     
 0.673
Avbf_16984
Uncharacterized protein.
     
 0.673
Avbf_01852
Ras-related protein Rab-32B.
     
 0.673
Avbf_05940
Hermansky-Pudlak syndrome 3 protein-like.
      
 0.438
Avbf_12972
General transcription factor IIH subunit 1.
      
 0.436
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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