STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_086502-oxoglutarate and iron-dependent oxygenase domain-containing protein 2. (206 aa)    
Predicted Functional Partners:
Avbf_18330
Glycosyltransferase 25 family member.
   
 0.665
Avbf_17006
Glycosyltransferase 25 family member.
   
 0.665
Avbf_13406
Glycosyltransferase 25 family member.
   
 0.665
Avbf_04902
Uncharacterized protein.
   
 0.665
Avbf_07715
Procollagen galactosyltransferase 1.
   
 0.665
Avbf_15504
Histone-lysine N-methyltransferase SUV39H2.
    
  0.579
Avbf_15505
Histone-lysine N-methyltransferase Su(Var)3-9.
    
  0.579
Avbf_10305
Histone-lysine N-methyltransferase EHMT2.
    
  0.579
Avbf_11435
SMP-LTD domain-containing protein.
    
  0.579
Avbf_03406
Histone-lysine N-methyltransferase ASH1L.
    
  0.577
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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