STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_06992Homeotic protein deformed. (203 aa)    
Predicted Functional Partners:
Avbf_03573
Homeobox protein H55.
  
 
0.897
Avbf_05407
Homeobox domain-containing protein.
   
 
 0.890
Avbf_05408
Homeobox protein abdominal-A-like protein.
   
 
0.890
Avbf_06274
Homeotic protein antennapedia.
   
 
0.858
Avbf_00144
Nuclear hormone receptor FTZ-F1.
    
 0.760
Avbf_17807
Homeobox protein Meis1.
   
 0.621
Avbf_04974
Homeobox protein TGIF2.
   
 0.524
Avbf_00596
Homeotic protein ultrabithorax.
   
 
0.520
Avbf_08989
Homeobox protein Hox-D3a.
  
 
 
 0.445
Avbf_07258
Protein roadkill.
    
   0.442
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.