STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_02129Sal-like protein 3. (1191 aa)    
Predicted Functional Partners:
Avbf_05957
Putative histone-binding protein Caf1.
    
 0.931
Avbf_02874
WD repeat-containing protein 73.
    
 0.917
Avbf_17409
POU domain protein.
    
 0.899
Avbf_08453
POU domain protein.
    
 0.871
Avbf_16130
POU domain protein.
    
 0.871
Avbf_05470
PHD finger protein 21A.
    
 0.755
Avbf_01009
Transcriptional repressor p66-alpha.
    
 0.754
Avbf_03033
Methyl-CpG-binding domain protein 3.
   
  0.746
Avbf_00290
Metastasis-associated protein MTA1.
    
 0.723
Avbf_02853
PHD finger protein 20-like protein 1.
   
  0.720
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.