Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01008 | Avbf_01564 | A0A444TF27 | A0A444TNW2 | Aryl hydrocarbon receptor nuclear translocator-like protein. | Nuclear receptor coactivator 2. | 0.415 |
Avbf_01008 | Avbf_03947 | A0A444TF27 | A0A444TFZ4 | Aryl hydrocarbon receptor nuclear translocator-like protein. | Paired box protein Pax-6. | 0.624 |
Avbf_01008 | Avbf_04607 | A0A444TF27 | A0A444SDH1 | Aryl hydrocarbon receptor nuclear translocator-like protein. | CREB-binding protein. | 0.938 |
Avbf_01008 | Avbf_06450 | A0A444TF27 | A0A444TT88 | Aryl hydrocarbon receptor nuclear translocator-like protein. | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | 0.551 |
Avbf_01564 | Avbf_01008 | A0A444TNW2 | A0A444TF27 | Nuclear receptor coactivator 2. | Aryl hydrocarbon receptor nuclear translocator-like protein. | 0.415 |
Avbf_01564 | Avbf_03947 | A0A444TNW2 | A0A444TFZ4 | Nuclear receptor coactivator 2. | Paired box protein Pax-6. | 0.673 |
Avbf_01564 | Avbf_04607 | A0A444TNW2 | A0A444SDH1 | Nuclear receptor coactivator 2. | CREB-binding protein. | 0.963 |
Avbf_03340 | Avbf_03947 | A0A444TFY5 | A0A444TFZ4 | Sphingosine kinase 1. | Paired box protein Pax-6. | 0.681 |
Avbf_03340 | Avbf_08382 | A0A444TFY5 | A0A444SS71 | Sphingosine kinase 1. | Mitochondrial import inner membrane translocase subunit Tim10. | 0.841 |
Avbf_03340 | Avbf_10551 | A0A444TFY5 | A0A444SFZ8 | Sphingosine kinase 1. | Mitochondrial import inner membrane translocase subunit Tim10 B. | 0.679 |
Avbf_03340 | Avbf_11476 | A0A444TFY5 | A0A444SNT2 | Sphingosine kinase 1. | Mitochondrial import inner membrane translocase subunit Tim9. | 0.658 |
Avbf_03947 | Avbf_01008 | A0A444TFZ4 | A0A444TF27 | Paired box protein Pax-6. | Aryl hydrocarbon receptor nuclear translocator-like protein. | 0.624 |
Avbf_03947 | Avbf_01564 | A0A444TFZ4 | A0A444TNW2 | Paired box protein Pax-6. | Nuclear receptor coactivator 2. | 0.673 |
Avbf_03947 | Avbf_03340 | A0A444TFZ4 | A0A444TFY5 | Paired box protein Pax-6. | Sphingosine kinase 1. | 0.681 |
Avbf_03947 | Avbf_04607 | A0A444TFZ4 | A0A444SDH1 | Paired box protein Pax-6. | CREB-binding protein. | 0.598 |
Avbf_03947 | Avbf_06450 | A0A444TFZ4 | A0A444TT88 | Paired box protein Pax-6. | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | 0.624 |
Avbf_03947 | Avbf_08382 | A0A444TFZ4 | A0A444SS71 | Paired box protein Pax-6. | Mitochondrial import inner membrane translocase subunit Tim10. | 0.925 |
Avbf_03947 | Avbf_10551 | A0A444TFZ4 | A0A444SFZ8 | Paired box protein Pax-6. | Mitochondrial import inner membrane translocase subunit Tim10 B. | 0.844 |
Avbf_03947 | Avbf_11476 | A0A444TFZ4 | A0A444SNT2 | Paired box protein Pax-6. | Mitochondrial import inner membrane translocase subunit Tim9. | 0.863 |
Avbf_03947 | Avbf_11568 | A0A444TFZ4 | A0A444STK3 | Paired box protein Pax-6. | Neuronal PAS domain-containing protein 2. | 0.624 |
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