Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01579 | Avbf_10869 | A0A444SYK1 | A0A444TG34 | Basement membrane-specific heparan sulfate proteoglycan core protein. | Uncharacterized protein. | 0.881 |
Avbf_05228 | Avbf_10869 | A0A444SXM1 | A0A444TG34 | Agrin. | Uncharacterized protein. | 0.881 |
Avbf_06642 | Avbf_10869 | A0A444TPG9 | A0A444TG34 | Alpha-2-macroglobulin receptor-associated protein. | Uncharacterized protein. | 0.868 |
Avbf_07381 | Avbf_10869 | A0A444SI91 | A0A444TG34 | Axin-1. | Uncharacterized protein. | 0.922 |
Avbf_10869 | Avbf_01579 | A0A444TG34 | A0A444SYK1 | Uncharacterized protein. | Basement membrane-specific heparan sulfate proteoglycan core protein. | 0.881 |
Avbf_10869 | Avbf_05228 | A0A444TG34 | A0A444SXM1 | Uncharacterized protein. | Agrin. | 0.881 |
Avbf_10869 | Avbf_06642 | A0A444TG34 | A0A444TPG9 | Uncharacterized protein. | Alpha-2-macroglobulin receptor-associated protein. | 0.868 |
Avbf_10869 | Avbf_07381 | A0A444TG34 | A0A444SI91 | Uncharacterized protein. | Axin-1. | 0.922 |
Avbf_10869 | Avbf_12006 | A0A444TG34 | A0A444TAP0 | Uncharacterized protein. | Protein eyes shut. | 0.863 |
Avbf_10869 | Avbf_13542 | A0A444TG34 | A0A444ST86 | Uncharacterized protein. | Basement membrane proteoglycan. | 0.881 |
Avbf_10869 | Avbf_13923 | A0A444TG34 | A0A444SKD4 | Uncharacterized protein. | Reelin. | 0.892 |
Avbf_10869 | Avbf_14022 | A0A444TG34 | A0A444SHF7 | Uncharacterized protein. | Reelin. | 0.892 |
Avbf_10869 | Avbf_18765 | A0A444TG34 | A0A444SNV5 | Uncharacterized protein. | Polyphosphatidylinositol phosphatase INP52. | 0.800 |
Avbf_10869 | Avbf_18766 | A0A444TG34 | A0A444SNT8 | Uncharacterized protein. | Phosphatidylinositide phosphatase SAC1. | 0.800 |
Avbf_12006 | Avbf_10869 | A0A444TAP0 | A0A444TG34 | Protein eyes shut. | Uncharacterized protein. | 0.863 |
Avbf_13542 | Avbf_10869 | A0A444ST86 | A0A444TG34 | Basement membrane proteoglycan. | Uncharacterized protein. | 0.881 |
Avbf_13923 | Avbf_10869 | A0A444SKD4 | A0A444TG34 | Reelin. | Uncharacterized protein. | 0.892 |
Avbf_13923 | Avbf_14022 | A0A444SKD4 | A0A444SHF7 | Reelin. | Reelin. | 0.530 |
Avbf_14022 | Avbf_10869 | A0A444SHF7 | A0A444TG34 | Reelin. | Uncharacterized protein. | 0.892 |
Avbf_14022 | Avbf_13923 | A0A444SHF7 | A0A444SKD4 | Reelin. | Reelin. | 0.530 |
page 1 of 2